IL_9AZC_268

3D structure

PDB id

9AZC (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human 80S ribosome (Consensus map)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.19 Å

Loop

Sequence

GGGAUCG*CAUGAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9AZC|1|S2|G|1604
9AZC|1|S2|G|1605
9AZC|1|S2|G|1606
9AZC|1|S2|A|1607
9AZC|1|S2|U|1608
9AZC|1|S2|C|1609
9AZC|1|S2|G|1610
*
9AZC|1|S2|C|1629
9AZC|1|S2|A|1630
9AZC|1|S2|U|1631
9AZC|1|S2|G|1632
9AZC|1|S2|A|1633
9AZC|1|S2|A|1634
9AZC|1|S2|C|1635

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SF

40S ribosomal protein S5

Chain SS

40S ribosomal protein S18

Chain ST

40S ribosomal protein S19