IL_9AZN_129

3D structure

PDB id

9AZN (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human A/P-P/E state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.98 Å

Loop

Sequence

GACAUGAG*CUGAUCGUU

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9AZN|1|L5|G|3946
9AZN|1|L5|A|3947
9AZN|1|L5|C|3948
9AZN|1|L5|A|3949
9AZN|1|L5|U|3950
9AZN|1|L5|G|3951
9AZN|1|L5|A|3952
9AZN|1|L5|G|3953
*
9AZN|1|L5|C|4059
9AZN|1|L5|U|4060
9AZN|1|L5|G|4061
9AZN|1|L5|A|4062
9AZN|1|L5|U|4063
9AZN|1|L5|C|4064
9AZN|1|L5|G|4065
9AZN|1|L5|U|4066
9AZN|1|L5|U|4067

Current chains

Chain L5

28S rRNA

Nearby chains

Chain Li

60S ribosomal protein L36

Chain SB

40S ribosomal protein S3a