3D structure

PDB id
9AZN (explore in PDB, NAKB, or RNA 3D Hub)
Description
In situ human A/P-P/E state 80S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.98 Å

Loop

Sequence
UCGUACG*UUGAAA
Length
13 nucleotides
Bulged bases
9AZN|1|L5|G|5041
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9AZN|1|L5|U|5003
9AZN|1|L5|C|5004
9AZN|1|L5|G|5005
9AZN|1|L5|U|5006
9AZN|1|L5|A|5007
9AZN|1|L5|C|5008
9AZN|1|L5|G|5009
*
9AZN|1|L5|U|5039
9AZN|1|L5|U|5040
9AZN|1|L5|G|5041
9AZN|1|L5|A|5042
9AZN|1|L5|A|5043
9AZN|1|L5|A|5044

Current chains

Chain L5
28S rRNA

Nearby chains

Chain LB
Large ribosomal subunit protein uL3
Chain LW
60S ribosomal protein L24
Chain Ld
60S ribosomal protein L31

Coloring options:

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