IL_9AZN_189
3D structure
- PDB id
- 9AZN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human A/P-P/E state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.98 Å
Loop
- Sequence
- UACGCA*UGAAA
- Length
- 11 nucleotides
- Bulged bases
- 9AZN|1|S3|C|65
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9AZN_189 not in the Motif Atlas
- Homologous match to IL_8P9A_379
- Geometric discrepancy: 0.2237
- The information below is about IL_8P9A_379
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_21667.2
- Basepair signature
- cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
9AZN|1|S3|U|63
9AZN|1|S3|A|64
9AZN|1|S3|C|65
9AZN|1|S3|G|66
9AZN|1|S3|C|67
9AZN|1|S3|A|68
*
9AZN|1|S3|U|81
9AZN|1|S3|G|82
9AZN|1|S3|A|83
9AZN|1|S3|A|84
9AZN|1|S3|A|85
Current chains
- Chain S3
- 18S rRNA
Nearby chains
- Chain LW
- 60S ribosomal protein L24
- Chain SG
- 40S ribosomal protein S6
- Chain SY
- 40S ribosomal protein S24
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