IL_9AZN_196
3D structure
- PDB id
- 9AZN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human A/P-P/E state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.98 Å
Loop
- Sequence
- CUGAC*GGAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9AZN_196 not in the Motif Atlas
- Geometric match to IL_4WFL_001
- Geometric discrepancy: 0.2692
- The information below is about IL_4WFL_001
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_87767.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 17
Unit IDs
9AZN|1|S3|C|188
9AZN|1|S3|U|189
9AZN|1|S3|G|190
9AZN|1|S3|A|191
9AZN|1|S3|C|192
*
9AZN|1|S3|G|207
9AZN|1|S3|G|208
9AZN|1|S3|A|209
9AZN|1|S3|U|210
9AZN|1|S3|G|211
Current chains
- Chain S3
- 18S rRNA
Nearby chains
- Chain SI
- 40S ribosomal protein S8
Coloring options: