IL_9AZN_197

3D structure

PDB id

9AZN (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human A/P-P/E state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.98 Å

Loop

Sequence

CAUU*ACCUCGGG

Length

12 nucleotides

Bulged bases

9AZN|1|S3|U|305, 9AZN|1|S3|G|307

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9AZN|1|S3|C|216
9AZN|1|S3|A|217
9AZN|1|S3|U|218
9AZN|1|S3|U|219
*
9AZN|1|S3|A|302
9AZN|1|S3|C|303
9AZN|1|S3|C|304
9AZN|1|S3|U|305
9AZN|1|S3|C|306
9AZN|1|S3|G|307
9AZN|1|S3|G|308
9AZN|1|S3|G|309

Current chains

Chain S3

18S rRNA

Nearby chains

Chain SE

Small ribosomal subunit protein eS4, X isoform

Chain SI

40S ribosomal protein S8