3D structure

PDB id
9AZN (explore in PDB, NAKB, or RNA 3D Hub)
Description
In situ human A/P-P/E state 80S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.98 Å

Loop

Sequence
GAUG*UAU
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9AZN|1|S3|G|1723
9AZN|1|S3|A|1724
9AZN|1|S3|U|1725
9AZN|1|S3|G|1726
*
9AZN|1|S3|U|1808
9AZN|1|S3|A|1809
9AZN|1|S3|U|1810

Current chains

Chain S3
18S rRNA

Nearby chains

Chain L5
Large subunit ribosomal RNA; LSU rRNA
Chain LV
60S ribosomal protein L23
Chain SX
40S ribosomal protein S23

Coloring options:

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