IL_9AZN_269
3D structure
- PDB id
- 9AZN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human A/P-P/E state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.98 Å
Loop
- Sequence
- CGGAU*AGAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9AZN_269 not in the Motif Atlas
- Homologous match to IL_8CRE_476
- Geometric discrepancy: 0.1776
- The information below is about IL_8CRE_476
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_15190.2
- Basepair signature
- cWW-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 24
Unit IDs
9AZN|1|S3|C|1742
9AZN|1|S3|G|1743
9AZN|1|S3|G|1744
9AZN|1|S3|A|1745
9AZN|1|S3|U|1746
*
9AZN|1|S3|A|1788
9AZN|1|S3|G|1789
9AZN|1|S3|A|1790
9AZN|1|S3|A|1791
9AZN|1|S3|G|1792
Current chains
- Chain S3
- 18S rRNA
Nearby chains
- Chain LW
- 60S ribosomal protein L24
- Chain SG
- 40S ribosomal protein S6
- Chain SI
- 40S ribosomal protein S8
Coloring options: