IL_9AZN_270

3D structure

PDB id

9AZN (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human A/P-P/E state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.98 Å

Loop

Sequence

CCCCG*CGGAGCG

Length

12 nucleotides

Bulged bases

9AZN|1|S3|C|1753, 9AZN|1|S3|C|1783

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9AZN|1|S3|C|1750
9AZN|1|S3|C|1751
9AZN|1|S3|C|1752
9AZN|1|S3|C|1753
9AZN|1|S3|G|1754
*
9AZN|1|S3|C|1778
9AZN|1|S3|G|1779
9AZN|1|S3|G|1780
9AZN|1|S3|A|1781
9AZN|1|S3|G|1782
9AZN|1|S3|C|1783
9AZN|1|S3|G|1784

Current chains

Chain S3

18S rRNA

Nearby chains

Chain LW

60S ribosomal protein L24

Chain SG

40S ribosomal protein S6