IL_9B0G_258
3D structure
- PDB id
- 9B0G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human Hibernating class4 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.57 Å
Loop
- Sequence
- CCG*CAAG
- Length
- 7 nucleotides
- Bulged bases
- 9B0G|1|S2|C|1701, 9B0G|1|S2|A|1835
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B0G_258 not in the Motif Atlas
- Homologous match to IL_8P9A_452
- Geometric discrepancy: 0.2738
- The information below is about IL_8P9A_452
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_18228.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
9B0G|1|S2|C|1700
9B0G|1|S2|C|1701
9B0G|1|S2|G|1702
*
9B0G|1|S2|C|1833
9B0G|1|S2|A|1834
9B0G|1|S2|A|1835
9B0G|1|S2|G|1836
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain CD
- Serbp1
- Chain Ln
- 60S ribosomal protein L41
- Chain SC
- 40S ribosomal protein S2
- Chain Sa
- 40S ribosomal protein S26
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