IL_9B0P_022

3D structure

PDB id

9B0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human Hibernating class1 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

9B0P|1|L5|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B0P|1|L5|A|466
9B0P|1|L5|U|467
9B0P|1|L5|U|468
9B0P|1|L5|C|469
9B0P|1|L5|A|470
9B0P|1|L5|A|471
9B0P|1|L5|C|472
*
9B0P|1|L5|G|682
9B0P|1|L5|C|683
9B0P|1|L5|G|684
9B0P|1|L5|C|685
9B0P|1|L5|A|686
9B0P|1|L5|U|687
9B0P|1|L5|U|688
9B0P|1|L5|U|689

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain LE

Large ribosomal subunit protein eL6

Chain Lr

60S ribosomal protein L28