IL_9B0Q_422
3D structure
- PDB id
- 9B0Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human top-back di-ribosome structure (Composite map)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGUAUG*CGAAG
- Length
- 11 nucleotides
- Bulged bases
- 9B0Q|1|l5|U|4634, 9B0Q|1|l5|U|4636
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B0Q_422 not in the Motif Atlas
- Homologous match to IL_8P9A_346
- Geometric discrepancy: 0.3222
- The information below is about IL_8P9A_346
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_98200.1
- Basepair signature
- cWW-L-R-tHW-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
9B0Q|1|l5|U|4632
9B0Q|1|l5|G|4633
9B0Q|1|l5|U|4634
9B0Q|1|l5|A|4635
9B0Q|1|l5|U|4636
9B0Q|1|l5|G|4637
*
9B0Q|1|l5|C|4662
9B0Q|1|l5|G|4663
9B0Q|1|l5|A|4664
9B0Q|1|l5|A|4665
9B0Q|1|l5|G|4666
Current chains
- Chain l5
- 28S rRNA [Homo sapiens]
Nearby chains
- Chain lB
- Large ribosomal subunit protein uL3
- Chain lW
- Ribosomal protein L24
- Chain ld
- 60S ribosomal protein L31
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