IL_9B0Q_525
3D structure
- PDB id
- 9B0Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human top-back di-ribosome structure (Composite map)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- ACUA*UUCU
- Length
- 8 nucleotides
- Bulged bases
- 9B0Q|1|s2|C|1403, 9B0Q|1|s2|U|1404
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B0Q_525 not in the Motif Atlas
- Homologous match to IL_8CRE_481
- Geometric discrepancy: 0.254
- The information below is about IL_8CRE_481
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_78800.2
- Basepair signature
- cWW-cSH-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
9B0Q|1|s2|A|1402
9B0Q|1|s2|C|1403
9B0Q|1|s2|U|1404
9B0Q|1|s2|A|1405
*
9B0Q|1|s2|U|1441
9B0Q|1|s2|U|1442
9B0Q|1|s2|C|1443
9B0Q|1|s2|U|1444
Current chains
- Chain s2
- 18S rRNA [Homo sapiens]
Nearby chains
- Chain sD
- Small ribosomal subunit protein uS3
- Chain sQ
- Small ribosomal subunit protein uS9
- Chain sU
- 40S ribosomal protein S20
- Chain sg
- Receptor of activated protein C kinase 1
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