IL_9B0S_068

3D structure

PDB id

9B0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human top-top di-ribosome structure (Composite map)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CGGUAA*UAAAUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B0S|1|L5|C|1732
9B0S|1|L5|G|1733
9B0S|1|L5|G|1734
9B0S|1|L5|U|1735
9B0S|1|L5|A|1736
9B0S|1|L5|A|1737
*
9B0S|1|L5|U|1792
9B0S|1|L5|A|1793
9B0S|1|L5|A|1794
9B0S|1|L5|A|1795
9B0S|1|L5|U|1796
9B0S|1|L5|G|1797

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain L7

5S ribosomal RNA; 5S rRNA

Chain LF

60S ribosomal protein L7

Chain LI

Ribosomal protein uL16-like

Chain LT

60S ribosomal protein L21