IL_9B0S_111
3D structure
- PDB id
- 9B0S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human top-top di-ribosome structure (Composite map)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- AGUCGG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 9B0S|1|L5|G|3839
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B0S_111 not in the Motif Atlas
- Homologous match to IL_8P9A_306
- Geometric discrepancy: 0.1019
- The information below is about IL_8P9A_306
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28217.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 10
Unit IDs
9B0S|1|L5|A|2850
9B0S|1|L5|G|2851
9B0S|1|L5|U|2852
9B0S|1|L5|C|2853
9B0S|1|L5|G|2854
9B0S|1|L5|G|2855
*
9B0S|1|L5|C|3837
9B0S|1|L5|U|3838
9B0S|1|L5|G|3839
9B0S|1|L5|U|3840
Current chains
- Chain L5
- 28S rRNA [Homo sapiens]
Nearby chains
- Chain LB
- Large ribosomal subunit protein uL3
- Chain LV
- 60S ribosomal protein L23
Coloring options: