3D structure

PDB id
9B0S (explore in PDB, NAKB, or RNA 3D Hub)
Description
In situ human top-top di-ribosome structure (Composite map)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
GGAAACGG*CUCGCC
Length
14 nucleotides
Bulged bases
9B0S|1|L5|C|4895
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9B0S|1|L5|G|4890
9B0S|1|L5|G|4891
9B0S|1|L5|A|4892
9B0S|1|L5|A|4893
9B0S|1|L5|A|4894
9B0S|1|L5|C|4895
9B0S|1|L5|G|4896
9B0S|1|L5|G|4897
*
9B0S|1|L5|C|4924
9B0S|1|L5|U|4925
9B0S|1|L5|C|4926
9B0S|1|L5|G|4927
9B0S|1|L5|C|4928
9B0S|1|L5|C|4929

Current chains

Chain L5
28S rRNA [Homo sapiens]

Nearby chains

Chain LE
Large ribosomal subunit protein eL6
Chain LM
60S ribosomal protein L14
Chain LO
60S ribosomal protein L13a

Coloring options:

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