IL_9B0S_191
3D structure
- PDB id
- 9B0S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human top-top di-ribosome structure (Composite map)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- UACGCA*UGAAA
- Length
- 11 nucleotides
- Bulged bases
- 9B0S|1|S2|C|65, 9B0S|1|S2|C|67
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B0S_191 not in the Motif Atlas
- Homologous match to IL_8P9A_379
- Geometric discrepancy: 0.2185
- The information below is about IL_8P9A_379
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_21667.2
- Basepair signature
- cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
9B0S|1|S2|U|63
9B0S|1|S2|A|64
9B0S|1|S2|C|65
9B0S|1|S2|G|66
9B0S|1|S2|C|67
9B0S|1|S2|A|68
*
9B0S|1|S2|U|81
9B0S|1|S2|G|82
9B0S|1|S2|A|83
9B0S|1|S2|A|84
9B0S|1|S2|A|85
Current chains
- Chain S2
- 18S rRNA [Homo sapiens]
Nearby chains
- Chain LW
- Ribosomal protein L24
- Chain SG
- 40S ribosomal protein S6
- Chain SY
- 40S ribosomal protein S24
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