3D structure

PDB id
9B0S (explore in PDB, NAKB, or RNA 3D Hub)
Description
In situ human top-top di-ribosome structure (Composite map)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
CAUU*ACCUCGGG
Length
12 nucleotides
Bulged bases
9B0S|1|S2|U|305, 9B0S|1|S2|G|307
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9B0S|1|S2|C|216
9B0S|1|S2|A|217
9B0S|1|S2|U|218
9B0S|1|S2|U|219
*
9B0S|1|S2|A|302
9B0S|1|S2|C|303
9B0S|1|S2|C|304
9B0S|1|S2|U|305
9B0S|1|S2|C|306
9B0S|1|S2|G|307
9B0S|1|S2|G|308
9B0S|1|S2|G|309

Current chains

Chain S2
18S rRNA [Homo sapiens]

Nearby chains

Chain SE
Small ribosomal subunit protein eS4, X isoform
Chain SI
40S ribosomal protein S8

Coloring options:

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