IL_9B0S_268

3D structure

PDB id

9B0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human top-top di-ribosome structure (Composite map)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGGAUCGG*CAUGAAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B0S|1|S2|G|1604
9B0S|1|S2|G|1605
9B0S|1|S2|G|1606
9B0S|1|S2|A|1607
9B0S|1|S2|U|1608
9B0S|1|S2|C|1609
9B0S|1|S2|G|1610
9B0S|1|S2|G|1611
*
9B0S|1|S2|C|1629
9B0S|1|S2|A|1630
9B0S|1|S2|U|1631
9B0S|1|S2|G|1632
9B0S|1|S2|A|1633
9B0S|1|S2|A|1634
9B0S|1|S2|C|1635

Current chains

Chain S2

18S rRNA [Homo sapiens]

Nearby chains

Chain SP

Small ribosomal subunit protein uS19

Chain SS

40S ribosomal protein S18

Chain ST

40S ribosomal protein S19