3D structure

PDB id
9B0S (explore in PDB, NAKB, or RNA 3D Hub)
Description
In situ human top-top di-ribosome structure (Composite map)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
GCCCGG*UCC
Length
9 nucleotides
Bulged bases
9B0S|1|l5|C|501, 9B0S|1|l5|C|502, 9B0S|1|l5|C|503, 9B0S|1|l5|G|504
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9B0S|1|l5|G|500
9B0S|1|l5|C|501
9B0S|1|l5|C|502
9B0S|1|l5|C|503
9B0S|1|l5|G|504
9B0S|1|l5|G|505
*
9B0S|1|l5|U|653
9B0S|1|l5|C|654
9B0S|1|l5|C|655

Current chains

Chain l5
28S rRNA [Homo sapiens]

Nearby chains

Chain lC
60S ribosomal protein L4
Chain lQ
60S ribosomal protein L18

Coloring options:

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