IL_9B0S_348

3D structure

PDB id

9B0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human top-top di-ribosome structure (Composite map)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CUCGCAGACCCGACGCCCGCCACG*CG

Length

26 nucleotides

Bulged bases

9B0S|1|l5|C|1707, 9B0S|1|l5|G|1708, 9B0S|1|l5|C|1718

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B0S|1|l5|C|1694
9B0S|1|l5|U|1695
9B0S|1|l5|C|1696
9B0S|1|l5|G|1697
9B0S|1|l5|C|1698
9B0S|1|l5|A|1699
9B0S|1|l5|G|1700
9B0S|1|l5|A|1701
9B0S|1|l5|C|1702
9B0S|1|l5|C|1703
9B0S|1|l5|C|1704
9B0S|1|l5|G|1705
9B0S|1|l5|A|1706
9B0S|1|l5|C|1707
9B0S|1|l5|G|1708
9B0S|1|l5|C|1709
9B0S|1|l5|C|1714
9B0S|1|l5|C|1715
9B0S|1|l5|G|1716
9B0S|1|l5|C|1717
9B0S|1|l5|C|1718
9B0S|1|l5|A|1719
9B0S|1|l5|C|1720
9B0S|1|l5|G|1721
*
9B0S|1|l5|C|1841
9B0S|1|l5|G|1842

Current chains

Chain l5

28S rRNA [Homo sapiens]

Nearby chains

Chain lC

60S ribosomal protein L4

Chain lF

60S ribosomal protein L7

Chain lQ

60S ribosomal protein L18

Chain lT

60S ribosomal protein L21

Chain lb

Large ribosomal subunit protein eL29