IL_9B0S_397

3D structure

PDB id

9B0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human top-top di-ribosome structure (Composite map)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGGUC*GGCGCCUAGC

Length

15 nucleotides

Bulged bases

9B0S|1|l5|G|2902, 9B0S|1|l5|G|2903, 9B0S|1|l5|A|3596

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B0S|1|l5|G|2901
9B0S|1|l5|G|2902
9B0S|1|l5|G|2903
9B0S|1|l5|U|2904
9B0S|1|l5|C|2905
*
9B0S|1|l5|G|3589
9B0S|1|l5|G|3590
9B0S|1|l5|C|3591
9B0S|1|l5|G|3592
9B0S|1|l5|C|3593
9B0S|1|l5|C|3594
9B0S|1|l5|U|3595
9B0S|1|l5|A|3596
9B0S|1|l5|G|3597
9B0S|1|l5|C|3598

Current chains

Chain l5

28S rRNA [Homo sapiens]

Nearby chains

Chain lR

60S ribosomal protein L19