IL_9B0S_463
3D structure
- PDB id
- 9B0S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human top-top di-ribosome structure (Composite map)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GAUG*CGC
- Length
- 7 nucleotides
- Bulged bases
- 9B0S|1|l7|U|84
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B0S_463 not in the Motif Atlas
- Homologous match to IL_8OI5_140
- Geometric discrepancy: 0.1111
- The information below is about IL_8OI5_140
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 213
Unit IDs
9B0S|1|l7|G|82
9B0S|1|l7|A|83
9B0S|1|l7|U|84
9B0S|1|l7|G|85
*
9B0S|1|l7|C|92
9B0S|1|l7|G|93
9B0S|1|l7|C|94
Current chains
- Chain l7
- 5S rRNA [Homo sapiens]
Nearby chains
- Chain l5
- Large subunit ribosomal RNA; LSU rRNA
- Chain lF
- 60S ribosomal protein L7
- Chain lI
- Ribosomal protein uL16-like
- Chain lS
- 60S ribosomal protein L18a
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