IL_9B0S_481

3D structure

PDB id

9B0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human top-top di-ribosome structure (Composite map)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CAUU*ACCUCGGG

Length

12 nucleotides

Bulged bases

9B0S|1|s2|U|305, 9B0S|1|s2|G|307

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B0S|1|s2|C|216
9B0S|1|s2|A|217
9B0S|1|s2|U|218
9B0S|1|s2|U|219
*
9B0S|1|s2|A|302
9B0S|1|s2|C|303
9B0S|1|s2|C|304
9B0S|1|s2|U|305
9B0S|1|s2|C|306
9B0S|1|s2|G|307
9B0S|1|s2|G|308
9B0S|1|s2|G|309

Current chains

Chain s2

18S rRNA [Homo sapiens]

Nearby chains

Chain sE

Small ribosomal subunit protein eS4, X isoform

Chain sI

40S ribosomal protein S8