IL_9B0S_558

3D structure

PDB id

9B0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human top-top di-ribosome structure (Composite map)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CCCCG*CGGAGCG

Length

12 nucleotides

Bulged bases

9B0S|1|s2|C|1753, 9B0S|1|s2|C|1783

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B0S|1|s2|C|1750
9B0S|1|s2|C|1751
9B0S|1|s2|C|1752
9B0S|1|s2|C|1753
9B0S|1|s2|G|1754
*
9B0S|1|s2|C|1778
9B0S|1|s2|G|1779
9B0S|1|s2|G|1780
9B0S|1|s2|A|1781
9B0S|1|s2|G|1782
9B0S|1|s2|C|1783
9B0S|1|s2|G|1784

Current chains

Chain s2

18S rRNA [Homo sapiens]

Nearby chains

Chain sG

40S ribosomal protein S6