IL_9B0S_559

3D structure

PDB id

9B0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human top-top di-ribosome structure (Composite map)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CCGGG*CCCUGG

Length

11 nucleotides

Bulged bases

9B0S|1|s2|C|1773

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B0S|1|s2|C|1755
9B0S|1|s2|C|1756
9B0S|1|s2|G|1757
9B0S|1|s2|G|1758
9B0S|1|s2|G|1759
*
9B0S|1|s2|C|1772
9B0S|1|s2|C|1773
9B0S|1|s2|C|1774
9B0S|1|s2|U|1775
9B0S|1|s2|G|1776
9B0S|1|s2|G|1777

Current chains

Chain s2

18S rRNA [Homo sapiens]

Nearby chains

Chain sG

40S ribosomal protein S6