IL_9B11_025

3D structure

PDB id

9B11 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human unrotated hibernating without CCDC124 state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

GUGUCG*CGACC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B11|1|L5|G|491
9B11|1|L5|U|492
9B11|1|L5|G|493
9B11|1|L5|U|494
9B11|1|L5|C|495
9B11|1|L5|G|496
*
9B11|1|L5|C|658
9B11|1|L5|G|659
9B11|1|L5|A|660
9B11|1|L5|C|661
9B11|1|L5|C|662

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4