IL_9B11_208
3D structure
- PDB id
- 9B11 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human unrotated hibernating without CCDC124 state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.77 Å
Loop
- Sequence
- CAU*AAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B11_208 not in the Motif Atlas
- Homologous match to IL_8CRE_412
- Geometric discrepancy: 0.0468
- The information below is about IL_8CRE_412
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_42997.3
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 20
Unit IDs
9B11|1|S2|C|459
9B11|1|S2|A|460
9B11|1|S2|U|461
*
9B11|1|S2|A|468
9B11|1|S2|A|469
9B11|1|S2|G|470
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain LV
- 60S ribosomal protein L23
- Chain SG
- 40S ribosomal protein S6
- Chain SY
- 40S ribosomal protein S24
Coloring options: