IL_9B11_250

3D structure

PDB id

9B11 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human unrotated hibernating without CCDC124 state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

AUUG*CUCGAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B11|1|S2|A|1287
9B11|1|S2|U|1288
9B11|1|S2|U|1289
9B11|1|S2|G|1290
*
9B11|1|S2|C|1309
9B11|1|S2|U|1310
9B11|1|S2|C|1311
9B11|1|S2|G|1312
9B11|1|S2|A|1313
9B11|1|S2|U|1314

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SK

40S ribosomal protein S10

Chain SM

Small ribosomal subunit protein eS12

Chain Sd

40S ribosomal protein S29

Chain Sf

Ubiquitin-40S ribosomal protein S27a