IL_9B11_267

3D structure

PDB id

9B11 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human unrotated hibernating without CCDC124 state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

GGGAUCGG*CAUGAAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B11|1|S2|G|1604
9B11|1|S2|G|1605
9B11|1|S2|G|1606
9B11|1|S2|A|1607
9B11|1|S2|U|1608
9B11|1|S2|C|1609
9B11|1|S2|G|1610
9B11|1|S2|G|1611
*
9B11|1|S2|C|1629
9B11|1|S2|A|1630
9B11|1|S2|U|1631
9B11|1|S2|G|1632
9B11|1|S2|A|1633
9B11|1|S2|A|1634
9B11|1|S2|C|1635

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SP

Small ribosomal subunit protein uS19

Chain SS

40S ribosomal protein S18

Chain ST

40S ribosomal protein S19