IL_9B11_281

3D structure

PDB id

9B11 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human unrotated hibernating without CCDC124 state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

CCCCGCC*GCGGAGCG

Length

15 nucleotides

Bulged bases

9B11|1|S2|C|1753, 9B11|1|S2|C|1783

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B11|1|S2|C|1750
9B11|1|S2|C|1751
9B11|1|S2|C|1752
9B11|1|S2|C|1753
9B11|1|S2|G|1754
9B11|1|S2|C|1755
9B11|1|S2|C|1756
*
9B11|1|S2|G|1777
9B11|1|S2|C|1778
9B11|1|S2|G|1779
9B11|1|S2|G|1780
9B11|1|S2|A|1781
9B11|1|S2|G|1782
9B11|1|S2|C|1783
9B11|1|S2|G|1784

Current chains

Chain S2

18S rRNA

Nearby chains

Chain LW

60S ribosomal protein L24

Chain SG

40S ribosomal protein S6