IL_9B24_001
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- UUUGUGUAGGAUAGGUGGGAGA*UCGUUGUUGAAAUACCACUCUGA
- Length
- 45 nucleotides
- Bulged bases
- 9B24|1|4|U|2334, 9B24|1|4|G|2335, 9B24|1|4|U|2341, 9B24|1|4|A|2342, 9B24|1|4|C|2384, 9B24|1|4|G|2385, 9B24|1|4|U|2386, 9B24|1|4|U|2395
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9B24|1|4|U|2330
9B24|1|4|U|2331
9B24|1|4|U|2332
9B24|1|4|G|2333
9B24|1|4|U|2334
9B24|1|4|G|2335
9B24|1|4|U|2336
9B24|1|4|A|2337
9B24|1|4|G|2338
9B24|1|4|G|2339
9B24|1|4|A|2340
9B24|1|4|U|2341
9B24|1|4|A|2342
9B24|1|4|G|2343
9B24|1|4|G|2344
9B24|1|4|U|2345
9B24|1|4|G|2346
9B24|1|4|G|2347
9B24|1|4|G|2348
9B24|1|4|A|2349
9B24|1|4|G|2350
9B24|1|4|A|2351
*
9B24|1|4|U|2383
9B24|1|4|C|2384
9B24|1|4|G|2385
9B24|1|4|U|2386
9B24|1|4|U|2387
9B24|1|4|G|2388
9B24|1|4|U|2389
9B24|1|4|U|2390
9B24|1|4|G|2391
9B24|1|4|A|2392
9B24|1|4|A|2393
9B24|1|4|A|2394
9B24|1|4|U|2395
9B24|1|4|A|2396
9B24|1|4|C|2397
9B24|1|4|C|2398
9B24|1|4|A|2399
9B24|1|4|C|2400
9B24|1|4|U|2401
9B24|1|4|C|2402
9B24|1|4|U|2403
9B24|1|4|G|2404
9B24|1|4|A|2405
Current chains
- Chain 4
- 23S rRNA part
Nearby chains
- Chain Y
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: