IL_9B24_008

3D structure

PDB id

9B24 (explore in PDB, NAKB, or RNA 3D Hub)

Description

WT strain gidB mutant mycobacterial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.47 Å

Loop

Sequence

GGC*GUAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9B24_008 not in the Motif Atlas

Geometric match to IL_7SZU_003

Geometric discrepancy: 0.3934

The information below is about IL_7SZU_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_75527.2

Basepair signature

cWW-cWW-cSH-cWW

Number of instances in this motif group

10

Unit IDs

9B24|1|A|G|77
9B24|1|A|G|78
9B24|1|A|C|79
*
9B24|1|A|G|90
9B24|1|A|U|91
9B24|1|A|A|92
9B24|1|A|C|93

Current chains

Chain A

RNA (1528-MER)

Nearby chains