IL_9B24_021
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- AGACG*CGGUAU
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B24_021 not in the Motif Atlas
- Homologous match to IL_4LFB_018
- Geometric discrepancy: 0.1977
- The information below is about IL_4LFB_018
- Detailed Annotation
- 6x5 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_82100.1
- Basepair signature
- cWW-tWW-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 3
Unit IDs
9B24|1|A|A|446
9B24|1|A|G|447
9B24|1|A|A|448
9B24|1|A|C|449
9B24|1|A|G|450
*
9B24|1|A|C|463
9B24|1|A|G|464
9B24|1|A|G|465
9B24|1|A|U|466
9B24|1|A|A|467
9B24|1|A|U|468
Current chains
- Chain A
- RNA (1528-MER)
Nearby chains
- Chain D
- Small ribosomal subunit protein uS4
- Chain P
- Small ribosomal subunit protein bS16
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