3D structure

PDB id
9B24 (explore in PDB, NAKB, or RNA 3D Hub)
Description
WT strain gidB mutant mycobacterial ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.47 Å

Loop

Sequence
CGCGUUGUU*GCGAUACGGG
Length
19 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9B24|1|A|C|574
9B24|1|A|G|575
9B24|1|A|C|576
9B24|1|A|G|577
9B24|1|A|U|578
9B24|1|A|U|579
9B24|1|A|G|580
9B24|1|A|U|581
9B24|1|A|U|582
*
9B24|1|A|G|617
9B24|1|A|C|618
9B24|1|A|G|619
9B24|1|A|A|620
9B24|1|A|U|621
9B24|1|A|A|622
9B24|1|A|C|623
9B24|1|A|G|624
9B24|1|A|G|625
9B24|1|A|G|626

Current chains

Chain A
RNA (1528-MER)

Nearby chains

Chain H
Small ribosomal subunit protein uS8
Chain O
Small ribosomal subunit protein uS15
Chain Q
Small ribosomal subunit protein uS17

Coloring options:

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