3D structure

PDB id
9B24 (explore in PDB, NAKB, or RNA 3D Hub)
Description
WT strain gidB mutant mycobacterial ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.47 Å

Loop

Sequence
CGUGAAAACUC*GGCGUGCGG
Length
20 nucleotides
Bulged bases
9B24|1|A|U|612
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9B24|1|A|C|583
9B24|1|A|G|584
9B24|1|A|U|585
9B24|1|A|G|586
9B24|1|A|A|587
9B24|1|A|A|588
9B24|1|A|A|589
9B24|1|A|A|590
9B24|1|A|C|591
9B24|1|A|U|592
9B24|1|A|C|593
*
9B24|1|A|G|608
9B24|1|A|G|609
9B24|1|A|C|610
9B24|1|A|G|611
9B24|1|A|U|612
9B24|1|A|G|613
9B24|1|A|C|614
9B24|1|A|G|615
9B24|1|A|G|616

Current chains

Chain A
RNA (1528-MER)

Nearby chains

Chain D
Small ribosomal subunit protein uS4
Chain H
Small ribosomal subunit protein uS8
Chain P
Small ribosomal subunit protein bS16
Chain Q
Small ribosomal subunit protein uS17

Coloring options:

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