IL_9B24_033
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- CGAAC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B24_033 not in the Motif Atlas
- Homologous match to IL_5J7L_037
- Geometric discrepancy: 0.1652
- The information below is about IL_5J7L_037
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.7
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 14
Unit IDs
9B24|1|A|C|759
9B24|1|A|G|760
9B24|1|A|A|761
9B24|1|A|A|762
9B24|1|A|C|763
*
9B24|1|A|G|779
9B24|1|A|G|780
9B24|1|A|U|781
9B24|1|A|A|782
9B24|1|A|G|783
Current chains
- Chain A
- RNA (1528-MER)
Nearby chains
- Chain K
- Small ribosomal subunit protein uS11
- Chain Y
- Large subunit ribosomal RNA; LSU rRNA
- Chain Z
- Large ribosomal subunit protein uL2
Coloring options: