IL_9B24_038
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- UGCAUG*CAUG
- Length
- 10 nucleotides
- Bulged bases
- 9B24|1|A|C|1034
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B24_038 not in the Motif Atlas
- Geometric match to IL_6CZR_365
- Geometric discrepancy: 0.2863
- The information below is about IL_6CZR_365
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_45699.1
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
9B24|1|A|U|1032
9B24|1|A|G|1033
9B24|1|A|C|1034
9B24|1|A|A|1035
9B24|1|A|U|1036
9B24|1|A|G|1037
*
9B24|1|A|C|1184
9B24|1|A|A|1185
9B24|1|A|U|1186
9B24|1|A|G|1187
Current chains
- Chain A
- RNA (1528-MER)
Nearby chains
- Chain C
- Small ribosomal subunit protein uS3
- Chain J
- Small ribosomal subunit protein uS10
- Chain N
- Small ribosomal subunit protein uS14B
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