IL_9B24_045
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- CUGC*GAGGAAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B24_045 not in the Motif Atlas
- Geometric match to IL_4LFB_050
- Geometric discrepancy: 0.2768
- The information below is about IL_4LFB_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_32376.1
- Basepair signature
- cWW-cSH-cWW-tWH-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
9B24|1|A|C|1139
9B24|1|A|U|1140
9B24|1|A|G|1141
9B24|1|A|C|1142
*
9B24|1|A|G|1156
9B24|1|A|A|1157
9B24|1|A|G|1158
9B24|1|A|G|1159
9B24|1|A|A|1160
9B24|1|A|A|1161
9B24|1|A|G|1162
Current chains
- Chain A
- RNA (1528-MER)
Nearby chains
- Chain I
- Small ribosomal subunit protein uS9
- Chain V
- Small ribosomal subunit protein uS2
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