IL_9B24_057
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- GGAAACG*CUAAGC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B24_057 not in the Motif Atlas
- Geometric match to IL_9E6Q_106
- Geometric discrepancy: 0.2922
- The information below is about IL_9E6Q_106
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_41504.1
- Basepair signature
- cWW-tSH-L-R-L-tHH-cWW
- Number of instances in this motif group
- 5
Unit IDs
9B24|1|U|G|24
9B24|1|U|G|25
9B24|1|U|A|26
9B24|1|U|A|27
9B24|1|U|A|28
9B24|1|U|C|29
9B24|1|U|G|30
*
9B24|1|U|C|56
9B24|1|U|U|57
9B24|1|U|A|58
9B24|1|U|A|59
9B24|1|U|G|60
9B24|1|U|C|61
Current chains
- Chain U
- 5S rRNA
Nearby chains
- Chain Y
- Large subunit ribosomal RNA; LSU rRNA
- Chain c
- Large ribosomal subunit protein uL5
- Chain k
- Large ribosomal subunit protein uL18
Coloring options: