IL_9B24_070
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- GUAC*GAGUGAAAGAGUAC
- Length
- 18 nucleotides
- Bulged bases
- 9B24|1|Y|G|591, 9B24|1|Y|A|595
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B24_070 not in the Motif Atlas
- Homologous match to IL_5J7L_255
- Geometric discrepancy: 0.1835
- The information below is about IL_5J7L_255
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_81516.2
- Basepair signature
- cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L
- Number of instances in this motif group
- 6
Unit IDs
9B24|1|Y|G|569
9B24|1|Y|U|570
9B24|1|Y|A|571
9B24|1|Y|C|572
*
9B24|1|Y|G|583
9B24|1|Y|A|584
9B24|1|Y|G|585
9B24|1|Y|U|586
9B24|1|Y|G|587
9B24|1|Y|A|588
9B24|1|Y|A|589
9B24|1|Y|A|590
9B24|1|Y|G|591
9B24|1|Y|A|592
9B24|1|Y|G|593
9B24|1|Y|U|594
9B24|1|Y|A|595
9B24|1|Y|C|596
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain o
- Large ribosomal subunit protein uL22
- Chain q
- Large ribosomal subunit protein uL24
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