3D structure

PDB id
9B24 (explore in PDB, NAKB, or RNA 3D Hub)
Description
WT strain gidB mutant mycobacterial ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.47 Å

Loop

Sequence
CCGAUGGGC*GGUUACUGACG
Length
20 nucleotides
Bulged bases
9B24|1|Y|G|996, 9B24|1|Y|A|1011
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9B24|1|Y|C|991
9B24|1|Y|C|992
9B24|1|Y|G|993
9B24|1|Y|A|994
9B24|1|Y|U|995
9B24|1|Y|G|996
9B24|1|Y|G|997
9B24|1|Y|G|998
9B24|1|Y|C|999
*
9B24|1|Y|G|1007
9B24|1|Y|G|1008
9B24|1|Y|U|1009
9B24|1|Y|U|1010
9B24|1|Y|A|1011
9B24|1|Y|C|1012
9B24|1|Y|U|1013
9B24|1|Y|G|1014
9B24|1|Y|A|1015
9B24|1|Y|C|1016
9B24|1|Y|G|1017

Current chains

Chain Y
23S rRNA

Nearby chains

Chain r
Large ribosomal subunit protein bL25

Coloring options:

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