IL_9B24_101

3D structure

PDB id

9B24 (explore in PDB, NAKB, or RNA 3D Hub)

Description

WT strain gidB mutant mycobacterial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.47 Å

Loop

Sequence

AGGUUG*CACCCUU

Length

13 nucleotides

Bulged bases

9B24|1|Y|U|1179, 9B24|1|Y|C|1196

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B24|1|Y|A|1175
9B24|1|Y|G|1176
9B24|1|Y|G|1177
9B24|1|Y|U|1178
9B24|1|Y|U|1179
9B24|1|Y|G|1180
*
9B24|1|Y|C|1194
9B24|1|Y|A|1195
9B24|1|Y|C|1196
9B24|1|Y|C|1197
9B24|1|Y|C|1198
9B24|1|Y|U|1199
9B24|1|Y|U|1200

Current chains

Chain Y

23S rRNA

Nearby chains

Chain e

Large ribosomal subunit protein uL11

Chain i

Large ribosomal subunit protein uL16

Chain r

Large ribosomal subunit protein bL25

Chain v

Large ribosomal subunit protein uL10