IL_9B24_124
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- CGUAAC*GGAGAAG
- Length
- 13 nucleotides
- Bulged bases
- 9B24|1|Y|G|1917
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B24_124 not in the Motif Atlas
- Homologous match to IL_5J7L_308
- Geometric discrepancy: 0.1368
- The information below is about IL_5J7L_308
- Detailed Annotation
- tSH-tSH-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_47346.2
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
9B24|1|Y|C|1904
9B24|1|Y|G|1905
9B24|1|Y|U|1906
9B24|1|Y|A|1907
9B24|1|Y|A|1908
9B24|1|Y|C|1909
*
9B24|1|Y|G|1914
9B24|1|Y|G|1915
9B24|1|Y|A|1916
9B24|1|Y|G|1917
9B24|1|Y|A|1918
9B24|1|Y|A|1919
9B24|1|Y|G|1920
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain Z
- Large ribosomal subunit protein uL2
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