IL_9B24_145

3D structure

PDB id

9B24 (explore in PDB, NAKB, or RNA 3D Hub)

Description

WT strain gidB mutant mycobacterial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.47 Å

Loop

Sequence

CAAC*GUGUUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B24|1|Y|C|2521
9B24|1|Y|A|2522
9B24|1|Y|A|2523
9B24|1|Y|C|2524
*
9B24|1|Y|G|2540
9B24|1|Y|U|2541
9B24|1|Y|G|2542
9B24|1|Y|U|2543
9B24|1|Y|U|2544
9B24|1|Y|G|2545

Current chains

Chain Y

23S rRNA

Nearby chains

Chain U

5S ribosomal RNA; 5S rRNA

Chain c

Large ribosomal subunit protein uL5

Chain k

Large ribosomal subunit protein uL18