IL_9B24_146
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- CGAG*CGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B24_146 not in the Motif Atlas
- Homologous match to IL_4WF9_087
- Geometric discrepancy: 0.1844
- The information below is about IL_4WF9_087
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.2
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 43
Unit IDs
9B24|1|Y|C|2574
9B24|1|Y|G|2575
9B24|1|Y|A|2576
9B24|1|Y|G|2577
*
9B24|1|Y|C|2588
9B24|1|Y|G|2589
9B24|1|Y|A|2590
9B24|1|Y|G|2591
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain 1
- Large ribosomal subunit protein bL35
- Chain k
- Large ribosomal subunit protein uL18
- Chain s
- Large ribosomal subunit protein bL27
- Chain y
- Large ribosomal subunit protein bL33A
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