IL_9B24_152

3D structure

PDB id

9B24 (explore in PDB, NAKB, or RNA 3D Hub)

Description

WT strain gidB mutant mycobacterial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.47 Å

Loop

Sequence

CUU*AUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9B24_152 not in the Motif Atlas

Geometric match to IL_4X4N_005

Geometric discrepancy: 0.1643

The information below is about IL_4X4N_005

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

9B24|1|Y|C|2685
9B24|1|Y|U|2686
9B24|1|Y|U|2687
*
9B24|1|Y|A|2711
9B24|1|Y|U|2712
9B24|1|Y|G|2713

Current chains

Chain Y

23S rRNA

Nearby chains

Chain i

Large ribosomal subunit protein uL16