IL_9B24_163

3D structure

PDB id

9B24 (explore in PDB, NAKB, or RNA 3D Hub)

Description

WT strain gidB mutant mycobacterial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.47 Å

Loop

Sequence

UU*ACGG

Length

6 nucleotides

Bulged bases

9B24|1|Y|C|2936, 9B24|1|Y|G|2937

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9B24_163 not in the Motif Atlas

Homologous match to IL_5J7L_349

Geometric discrepancy: 0.2348

The information below is about IL_5J7L_349

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_42626.2

Basepair signature

cWW-cWW

Number of instances in this motif group

14

Unit IDs

9B24|1|Y|U|2919
9B24|1|Y|U|2920
*
9B24|1|Y|A|2935
9B24|1|Y|C|2936
9B24|1|Y|G|2937
9B24|1|Y|G|2938

Current chains

Chain Y

23S rRNA

Nearby chains

Chain j

Large ribosomal subunit protein bL17