IL_9B4Z_139

3D structure

PDB id

9B4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (N1-methylated 16S A1408 + arbekacin)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B4Z|1|BA|U|1851
9B4Z|1|BA|U|1852
9B4Z|1|BA|A|1853
9B4Z|1|BA|A|1854
9B4Z|1|BA|U|1855
9B4Z|1|BA|U|1856
9B4Z|1|BA|G|1857
9B4Z|1|BA|A|1858
9B4Z|1|BA|U|1859
9B4Z|1|BA|G|1860
*
9B4Z|1|BA|U|1882
9B4Z|1|BA|U|1883
9B4Z|1|BA|G|1884
9B4Z|1|BA|A|1885
9B4Z|1|BA|U|1886
9B4Z|1|BA|C|1887
9B4Z|1|BA|G|1888
9B4Z|1|BA|A|1889
9B4Z|1|BA|A|1890
9B4Z|1|BA|G|1891

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AY

Transfer RNA; tRNA