IL_9B50_020

3D structure

PDB id

9B50 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (unmethylated 16S A1408 + arbekacin)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UAUGAAGAAGGC*GUUGUAAAGUA

Length

23 nucleotides

Bulged bases

9B50|1|AA|G|413

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B50|1|AA|U|407
9B50|1|AA|A|408
9B50|1|AA|U|409
9B50|1|AA|G|410
9B50|1|AA|A|411
9B50|1|AA|A|412
9B50|1|AA|G|413
9B50|1|AA|A|414
9B50|1|AA|A|415
9B50|1|AA|G|416
9B50|1|AA|G|417
9B50|1|AA|C|418
*
9B50|1|AA|G|425
9B50|1|AA|U|426
9B50|1|AA|U|427
9B50|1|AA|G|428
9B50|1|AA|U|429
9B50|1|AA|A|430
9B50|1|AA|A|431
9B50|1|AA|A|432
9B50|1|AA|G|433
9B50|1|AA|U|434
9B50|1|AA|A|435

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AD

30S ribosomal protein S4